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CODE4LIB  June 2012

CODE4LIB June 2012

Subject:

Re: Best way to process large XML files

From:

"Reese, Terry" <[log in to unmask]>

Reply-To:

Code for Libraries <[log in to unmask]>

Date:

Fri, 8 Jun 2012 11:43:53 -0700

Content-Type:

text/plain

Parts/Attachments:

Parts/Attachments

text/plain (33 lines)

I would really consider SAX.  In MarcEdit, I had originally utilized an XSLT process for handling MARCXML translations (using both SAXON and MSXML parsers) -- but as you noticed -- there ends up being an upper limit to what you can process.  The break point for me was when working with some researchers experimenting with data from the HathiTrust and they had a 32 GB XML file of MARCXML that needed to be processed.  Using the DOM model, the process was untenable.  Re-working the code so that it was SAX based -- required building, to some degree, the same type of templating to react to specific elements and nested elements -- but shifted processing time so that it took ~8 minutes to translate those 32 GBs of MARCXML data into MARC (and allowed me to include code that handled some common issues related to field length, etc. at the point of translation).

Not knowing what your XML files look like, my guess is that if you do it right, you can template your SAX code in such a way that the actual processing code is smaller and much more efficient than anything you could create using a DOM method.

--tr

-----Original Message-----
From: Code for Libraries [mailto:[log in to unmask]] On Behalf Of Kyle Banerjee
Sent: Friday, June 08, 2012 11:36 AM
To: [log in to unmask]
Subject: [CODE4LIB] Best way to process large XML files

I'm working on a script that needs to be able to crosswalk at least a couple hundred XML files regularly, some of which are quite large.

I've thought of a number of ways to go about this, but I wanted to bounce this off the list since I'm sure people here deal with this problem all the time. My goal is to make something that's easy to read/maintain without pegging the CPU and consuming too much memory.

The performance and load I'm seeing from running the files through LibXML and SimpleXML on the large files is completely unacceptable. SAX is not out of the question, but I'm trying to avoid it if possible to keep the code more compact and easier to read.


I'm tempted to streamedit out all line breaks since they occur in unpredictable places and put new ones at the end of each record into a temp file. Then I can read the temp file one line at a time and process using SimpleXML. That way, there's no need to load giant files into memory, create huge arrays, etc and the code would be easy enough for a 6th grader to follow. My proposed method doesn't sound very efficient to me, but it should consume predictable resources which don't increase with file size.

How do you guys deal with large XML files? Thanks,

kyle

<rant>Why the heck does the XML spec require a root element, particularly since large files usually consist of a large number of records/documents? This makes it absolutely impossible to process a file of any size without resorting to SAX or string parsing -- which takes away many of the advantages you'd normally have with an XML structure. </rant>

--
----------------------------------------------------------
Kyle Banerjee
Digital Services Program Manager
Orbis Cascade Alliance
<[log in to unmask]>[log in to unmask] / 503.999.9787

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