Good evening,
Great to hear about all these options for publication management. Weill Cornell Medicine has a tool as well: ReCiter.
ReCiter is a highly accurate, machine-learning system for inferring which publications in PubMed a given person has authored. ReCiter includes a Java application, a DynamoDB-hosted database, and a set of RESTful microservices which allow institutions to maintain accurate and up-to-date author publication lists for thousands of people.
This software is optimized for disambiguating authorship in PubMed and, optionally, Scopus. ReCiter rapidly and accurately (98% accuracy in a forthcoming paper) identifies articles, including those at previous affiliations, by a given person. It does this by leveraging institutionally maintained identity data (e.g., departments, relationships, email addresses, year of degree, etc.)
Running ReCiter daily, we can ensure that the desired users are the first to learn when a new publication has appeared in PubMed. ReCiter is freely available and open source under the Apache 2.0 license.
Check out our demo video:
https://www.youtube.com/watch?v=MwaIXHc4PzI&feature=youtu.be
You can read more about ReCiter and download the code here:
https://github.com/wcmc-its/reciter/
Terrie
Terrie R. Wheeler, AMLS
Director, Samuel J. Wood Library and C.V. Starr Biomedical Information Center
Weill Cornell Medicine
Information Technologies & Services
1300 York Avenue
New York, NY 10065
T 646.962.2469
[log in to unmask]<mailto:[log in to unmask]>
On 1/21/20, 5:14 AM, "Code for Libraries on behalf of Thomas San Filippo" <[log in to unmask] on behalf of [log in to unmask]> wrote:
Thanks, Deborah. I'd be really interested in seeing that super-messy
turn-it-to-APA code if you've got it on GitHub or something.
*Thomas San Filippo*
/Systems and Educational Technology Liaison/
Pronouns: he/him/his; they/them/their(s)
Madeleine Clark Wallace Library
<https://urldefense.proofpoint.com/v2/url?u=https-3A__wheatoncollege.edu_academics_library_&d=DwIDaQ&c=lb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s&r=yRulx6NdIwxgPIKyRtodsQO7-Egt1OOrdAWAlh1FsEA&m=OkLgioe460WQ4bAB28yVnrh8C0YLV0GzE2IW5_vRbuE&s=TA3Lh-pFo58-mioceM2DrEjRuLkNLvMGdPiA5WJyoA4&e= >, G34
Wheaton College <https://urldefense.proofpoint.com/v2/url?u=https-3A__wheatoncollege.edu&d=DwIDaQ&c=lb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s&r=yRulx6NdIwxgPIKyRtodsQO7-Egt1OOrdAWAlh1FsEA&m=OkLgioe460WQ4bAB28yVnrh8C0YLV0GzE2IW5_vRbuE&s=UCGMTEM1NhDAbUBferuxbJUgQFDnpBXytQ1xGok1vbo&e= >
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On 1/20/20 8:44 PM, Fitchett, Deborah wrote:
> We use Elements as our research information system. We also had some existing staff profile pages (based on Sharepoint). Our ITS was grabbing content direct from the Elements database to insert on the profile pages, I said “…Have you considered using the API?” and they said “…There’s an API?” so long story short I wrote some code that took the staff member’s ID, queried the API, and returned a bunch of html listing their research outputs in beautiful APA referencing format, which the profile pages ingest by, presumably, magic.
>
> Over the years it’s sporadically had various minor issues (eg an apparently-minor change to the API structure; or a stubborn caching issue on the ITS side) and it was often slow especially for the most prolific researchers (I only got around to adding caching functionality last year) so all in all I’m really glad we’re adding the Discovery module in Elements that will do this all properly so I don’t have to maintain the thing.
>
> It’s so much fun coding new stuff, it’s just sad that that’s only maybe 10% of the total lifetime work… ☺
>
> Anyway, short version: the API side of it was pretty straight-forward and even version updates weren’t too much of a hassle to resolve; the turning-it-into-APA involved some super messy code but was highly stable; the integration into the profiles was probably the hard part but fortunately not my problem.
>
> Deborah
>
> From: Code for Libraries <[log in to unmask]> On Behalf Of Thomas San Filippo
> Sent: Saturday, 18 January 2020 3:10 AM
> To: [log in to unmask]
> Subject: Re: [CODE4LIB] API feeding faculty publication profiles
>
> We would also be very interested, even if you're not health/medical.
>
> Thanks!
>
>
> *Thomas San Filippo*
> /Systems and Educational Technology Liaison/
>
> Pronouns: he/him/his; they/them/their(s)
>
> Madeleine Clark Wallace Library
> <https://urldefense.proofpoint.com/v2/url?u=https-3A__wheatoncollege.edu_academics_library_&d=DwIDaQ&c=lb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s&r=yRulx6NdIwxgPIKyRtodsQO7-Egt1OOrdAWAlh1FsEA&m=OkLgioe460WQ4bAB28yVnrh8C0YLV0GzE2IW5_vRbuE&s=TA3Lh-pFo58-mioceM2DrEjRuLkNLvMGdPiA5WJyoA4&e= <https://urldefense.proofpoint.com/v2/url?u=https-3A__wheatoncollege.edu_academics_library_&d=DwIDaQ&c=lb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s&r=yRulx6NdIwxgPIKyRtodsQO7-Egt1OOrdAWAlh1FsEA&m=OkLgioe460WQ4bAB28yVnrh8C0YLV0GzE2IW5_vRbuE&s=TA3Lh-pFo58-mioceM2DrEjRuLkNLvMGdPiA5WJyoA4&e= >>, G34
> Wheaton College <https://urldefense.proofpoint.com/v2/url?u=https-3A__wheatoncollege.edu&d=DwIDaQ&c=lb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s&r=yRulx6NdIwxgPIKyRtodsQO7-Egt1OOrdAWAlh1FsEA&m=OkLgioe460WQ4bAB28yVnrh8C0YLV0GzE2IW5_vRbuE&s=UCGMTEM1NhDAbUBferuxbJUgQFDnpBXytQ1xGok1vbo&e= <https://urldefense.proofpoint.com/v2/url?u=https-3A__wheatoncollege.edu&d=DwIDaQ&c=lb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s&r=yRulx6NdIwxgPIKyRtodsQO7-Egt1OOrdAWAlh1FsEA&m=OkLgioe460WQ4bAB28yVnrh8C0YLV0GzE2IW5_vRbuE&s=UCGMTEM1NhDAbUBferuxbJUgQFDnpBXytQ1xGok1vbo&e= >>
> 26 E. Main Street, Norton, MA 02766 <https://urldefense.proofpoint.com/v2/url?u=https-3A__goo.gl_maps_d5JvoKZUEXy&d=DwIDaQ&c=lb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s&r=yRulx6NdIwxgPIKyRtodsQO7-Egt1OOrdAWAlh1FsEA&m=OkLgioe460WQ4bAB28yVnrh8C0YLV0GzE2IW5_vRbuE&s=U0K4vZyhUpdXl1Vai2XJclC3W4WWDDGDaMKQYJT8MEY&e= <https://urldefense.proofpoint.com/v2/url?u=https-3A__goo.gl_maps_d5JvoKZUEXy&d=DwIDaQ&c=lb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s&r=yRulx6NdIwxgPIKyRtodsQO7-Egt1OOrdAWAlh1FsEA&m=OkLgioe460WQ4bAB28yVnrh8C0YLV0GzE2IW5_vRbuE&s=U0K4vZyhUpdXl1Vai2XJclC3W4WWDDGDaMKQYJT8MEY&e= >>
> (508) 286-5601 <tel:+15082865601>
> Twitter: @WallaceLibrary <https://urldefense.proofpoint.com/v2/url?u=https-3A__twitter.com_WallaceLibrary&d=DwIDaQ&c=lb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s&r=yRulx6NdIwxgPIKyRtodsQO7-Egt1OOrdAWAlh1FsEA&m=OkLgioe460WQ4bAB28yVnrh8C0YLV0GzE2IW5_vRbuE&s=wmrb2_fvxqwdJIAXRalafBFwe_fdB3ME77xu0WomcsE&e= <https://urldefense.proofpoint.com/v2/url?u=https-3A__twitter.com_WallaceLibrary&d=DwIDaQ&c=lb62iw4YL4RFalcE2hQUQealT9-RXrryqt9KZX2qu2s&r=yRulx6NdIwxgPIKyRtodsQO7-Egt1OOrdAWAlh1FsEA&m=OkLgioe460WQ4bAB28yVnrh8C0YLV0GzE2IW5_vRbuE&s=wmrb2_fvxqwdJIAXRalafBFwe_fdB3ME77xu0WomcsE&e= >> |
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> On 1/16/20 4:22 PM, Elizabeth Huggins wrote:
>> Hello,
>>
>> My library is looking at platforms for faculty publication profiles. If
>> you’re working at health sciences or medical library that uses an API to
>> feed publications into faculty profiles, I would love to hear from you.
>> Please email me directly at [log in to unmask]<mailto:[log in to unmask]>.
>>
>>
>> Thank you,
>>
>> Elizabeth Huggins
>>
>> Elizabeth Huggins
>> MALIS '11
>> www.linkedin.com/pub/elizabeth-huggins/43/417/172<http://www.linkedin.com/pub/elizabeth-huggins/43/417/172>
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